• Interested in a Summer Research Opportunity – Apply Now

Interested in spending the summer engaged in an exciting research project? With February fast approaching, now is the time to prepare your materials and request letters of recommendation in order to apply for summer research opportunities including those listed below with February deadlines.

Amgen Scholars Program 
The Amgen Scholars Program, a competitive summer program providing undergraduate students the opportunity to work full-time on independent research projects under the guidance of a research scientist, is hosted at thirteen institutions in the United States. Each host institution has its own application process; visit the links below for information on each institution’s program. The application deadline for all programs (except Caltech) is February 3, 2020. Applications for the Caltech program are due February 15th. Amgen research is conducted in fields including biochemistry, bioinformatics, biotechnology, chemical and biomolecular engineering, chemistry, immunology, medical pharmacology, microbiology, molecular biology, molecular genetics, molecular medicine, molecular pharmacology, neurobiology, neuroscience, pathology, physiological psychology, physiological science, statistics, and toxicology. Funding levels vary by program but most include a stipend (between $3,500 and $6,500), a housing and/or meal allowance, and travel expenses.


UCSD MSTP Summer Undergraduate Research Fellowship (SURF) Program
Deadline: February 2, 2020
https://reumanager.com/mstp-surf/
The Medical Scientist Training Program at UC San Diego is designed for students interested in learning about a career as a physician-scientist. The program features an 8-week research project, weekly seminars, and a physician-scientist clinical shadowing experience. Students from groups underrepresented in health-related sciences and individuals from disadvantaged backgrounds are encouraged to apply. $3,200 stipend and room provided. 

Summer Undergraduate Research Fellowship (SURF) Program – UT Southwestern Medical Center
Deadline: February 3, 2020
http://www.utsouthwestern.edu/education/graduate-school/programs/non-degree-programs/surf.html
The Summer Undergraduate Research Fellowship (SURF) Program at UT Southwestern’s Graduate School of Biomedical Sciences is designed for students interested in pursuing a Ph.D. or M.D./Ph.D. career in biomedical research. Applicants to this 10-week program must have completed their sophomore year in an undergraduate science degree program. $4,000 stipend.

Quantitative and Physical Sciences Summer Undergraduate Research Fellowship (QP-SURF) Program – UT Southwestern Medical Center
Deadline: February 3, 2020
http://www.utsouthwestern.edu/education/graduate-school/programs/non-degree-programs/qp-surf.html
The Summer Undergraduate Research Fellowship (SURF) Program at UT Southwestern’s Graduate School of Biomedical Sciences is designed for students interested in pursuing a Ph.D. or M.D./Ph.D. career in biomedical research. Applicants must be enrolled in a physics, computer science, mathematics, biomedical engineering, or chemistry degree program and have completed their sophomore year. $4,000 stipend.

Woods Hole Oceanographic Institution (WHOI) Summer Student Fellowship
Deadline: February 5, 2020
http://www.whoi.edu/main/summer-student-fellowship
The Summer Student Fellowship provides undergraduates with an interest in ocean sciences, oceanographic engineering, mathematics, or marine policy with a meaningful first-hand introduction to research in those areas. Students who have completed their junior year prior to the start of fellowship period in summer 2020 are eligible to apply. Stipend of approximately $650/week for 10-12 weeks and institutional housing provided.

Hartford Hospital Summer Student Pre-Med & Research Program 
Deadline: February 7, 2020
https://hartfordhospital.org/health-professionals/education/residencies-fellowships/summer-student-pre-med-research-program
This 10-week program offers pre-med students an introduction to research methodology, patient treatment, and ethical issues in medicine. Applicants must be pre-med students completing their junior year as of May 2020. $3,400 award for selected students.

Materials Research Science and Engineering Center REU at Northwestern University
Deadline: February 14, 2020
http://mrsec.northwestern.edu/undergraduate-opportunities/
REU students will have the opportunity to contribute to a research project led by a center faculty member expanding their science and engineering experience. Students with an interest in nanomaterials and majoring in a science or engineering field are encouraged to apply.  Participants receive a $4,500 stipend, a travel allowance, and on-campus housing.

BIT SURE: BIoTechnology-based Sequencing-based Undergraduate Research Experience at North Carolina State University
Deadline: February 14, 2020
http://biotech.ncsu.edu/pages/nsf-reu/
The BIT SURE program funds ten undergraduates to work on research projects that utilize next-generation sequencing (NGS) tools. This 10-week program includes a professional development component. $5,500 stipend and housing provided.

Maryland Sea Grant REU Program
Deadline: February 14, 2020
http://www.mdsg.umd.edu/topics/research-experiences-undergraduates/research-experiences-undergraduates
Fifteen students are selected to conduct marine research on the Chesapeake Bay at one of two University of Maryland Center for Environmental Sciences laboratories. This 12-week REU is designed for students majoring in marine science, ecology, environmental science, biology and chemistry. Preference is given to students who are rising seniors. $6,000 stipend and housing costs are provided.

Robert Frederick Smith Internship Program, National Museum of African American History and Culture
Deadline: February 15, 2020
https://nmaahc.si.edu/connect/osp/rfsinterns
These 12-week summer internships offer undergraduates the opportunity to work on research projects that focus on digital imaging, media preservation, digital preservation of personal and community objects, collections information management, and recording and preserving oral histories. Interns will be located onsite with the National Museum of African American History & Culture and offsite at select African American museums, museums of Historically Black Colleges and Universities, and other institution dedicated to preserving African American history and culture. Stipend of $600/week.

Building Diversity in Biomedical Sciences – Summer Research Program at Tufts University School of Medicine
Deadline: February 15, 2020
https://sackler.tufts.edu/admissions/nonDegreePrograms/BDBS
The Building Diversity in Biomedical Sciences (BDBS) Program offers a 10-week, mentored research experience for students interested in pursuing a PhD or MD/PhD.  Participants in the program also receive training in written and oral communication of scientific data and learn about careers in biomedical science through workshops. Stipend of $4,000, on-campus housing and travel expenses within the US are provided.

Bigelow Laboratory for Ocean Sciences REU Program
Deadline: February 15, 2020
http://www.bigelow.org/education/reu/
This highly competitive, 10-week REU program pairs students with scientist mentors for a hands-on, independent research experience. Student applicants should have a minimum of one year of basic biology and at least one earth or ocean science course. Housing and $5,000 stipend provided.

Molecular Biology REU at the Ohio State University
Deadline: February 15, 2020
https://molgen.osu.edu/research-experience-undergraduates
This NSF-funded research program is hosted by the Departments of Molecular Genetics and Microbiology and the Division of Biochemistry at Ohio State. Selected students will receive a $6,000 stipend and university housing. Students from groups historically underrepresented in the sciences are encouraged to apply.

 

HRPSU20

Faculty Mentor Project Description Opportunity Link
Dr. Corey Acker
Department of Cell Biology
The student will support testing of new voltage-sensitive dyes using cell culture assays. Custom fluorescence microscopy equipment is used along with patch clamp electrophysiology to control and monitor the voltage inside cells, including human stem cell derived heart cells, by recording voltage changes optically as well as electrically. MATLAB is used for all aspects, from hardware control to data analysis. SU20-1
Dr. Byoung-Il Bae 

Department of Neuroscience

The student will study the neurodevelopmental basis of autism spectrum disorder. She/he will characterize rare variants of the neurodevelopmental gene ASPM, which have been implicated in autism. She/he will generate the mutant constructs by site directed mutagenesis, and evaluate their effects on the protein levels of ASPM, the Wnt/beta-catenin signaling pathway, and neural progenitor cell proliferation. Successful completion of this project will elucidate how young patients with autism have larger than normal head circumferences (“macrocephaly”), and how abnormal neurodevelopment alters neural circuits for social behaviors. SU20-2
Dr. Jean-Denis Beaudoin
Department of Genetics and Genome Sciences
The trainee will have the opportunity to use CRISPR technologies to generate zebrafish loss of function mutant of RNA helicases. This project includes bioinformatics search of RNA helicase candidates, design of CRISPR strategies, injection of CRISPRs in zebrafish embryos, genotyping fish to find mutant alleles and look for developmental and molecular defects in loss of function mutants. Depending on the trainee’s interest, there is also a possibility of using cell lines to study translation regulation using transfection and massive parallel reporter assays (measuring the regulatory activity of thousands of sequences in a single experiment using high throughput sequencing). SU20-3
Dr. Michael Blinov
Center for Cell Analysis and Modeling
Mathematical modeling of biological processes is important to gain understanding of the underlying biological mechanisms and predict dynamics and outcomes of experiments and medical interventions. Mathematical models describe interactions among components of biological systems. Models are implemented and simulated in the Virtual Cell (http://vcell.org) software using GUI. We will develop a set of small models (ModelBricks, http://modelbricks.org) that serve as building blocks for larger models. SU20-4
Dr. Margaret J. Briggs-Gowan
Department of Psychiatry
The Adaptation and Resilience in Childhood Study is an NIMH-funded study investigating the effects of domestic violence on young children, ages 4-6 years. The summer intern will have the opportunity to assist with study activities which include developmental testing, computerized activities that assess children’s processing of facial stimuli, puppet interviews, and in-depth interviews with mothers about family life and the child’s development, postraumatic stress, and well-being. Psychophysiological data are acquired during visits, including heart rate, skin conductance and event-related potentials. The summer intern will be an integral part of the study team and will have ample opportunity to get hands on research experience. SU20-5
Dr. Caroline Dealy
Departments of Reconstructive Sciences, Biomedical Engineering, Orthopedic Surgery and Cell Biology
The overall goal of this project is to develop a clinically-relevant approach to improve articular cartilage repair. In animal studies, we have identified a growth factor that stimulates cartilage repair potential by tissue-resident progenitor cells present in articular cartilage. This summer project will take the first translational step towards our goal by evaluating the effects of the pro-regenerative growth factor on progenitor cells in human articular cartilage. The project will identify the optimal dose and duration of growth factor treatment that maximally stimulates progenitor cell repair potential. Techniques will include tissue culture, histology, PCR, immunohistochemistry, confocal microscopy and digital imaging. SU20-6
Dr. Jennifer Garza
Department of Medicine, Division of Occupational and Environmental Medicine
We are seeking students interested in a summer research opportunity to join the UConn Study on Aging, Musculoskeletal Health, and Retirement (UConn-SAM) team. For their summer projects, students will measure work and out-of-work activity patterns of UConn-SAM participants with and without eldercare responsibilities. The opportunity includes field work, recruitment and interaction with study participants, and analysis of work and out-of-work activity data. Students will test the hypothesis that individuals with eldercare responsibilities will have different work and out-of-work activity patterns compared to those without eldercare responsibilities. SU20-7
Dr. Damion Grasso 
Department of Psychiatry
Student effort would involve interacting with human research participants and participating in data collection/management on two primary projects conducted at our Family Adversity and Resilience Research Program in West Hartford. The first is a follow-up component of an NICHD funded study examining the intergenerational transmission of trauma and stress in mothers and their infants. Research activities involve a 3-hour visit in which mother and infant participate in a laboratory stress paradigm and physiological data are collected to measures infant stress reactivity. The second is an NIMH funded study examining biological and behavioral indicators of stress reactivity to explain the relationship between early violence exposure and mental health problems in 4- to 6-year-old children. Research activities involve a 4-hour visit with parent and child specific assessments and mother-child tasks. SU20-8
Dr. Carolyn Greene
Department of Psychiatry
I am seeking an undergraduate student intern to assist with the Parent and Child Emotions Study (PACES) a research study investigating emotion regulation among parents and children who have experienced trauma. The intern will assist with parent and child visits to our laboratory, where families will be completing questionnaires and engaging in dyadic tasks during which we will collect physiological and observational data. The intern will also assist with recruitment activities in the community, screening and scheduling subjects, administrative tasks, and data entry and analysis, and have the opportunity to utilize data from a prior study to develop a poster or paper on emotion regulation and children’s functioning. The intern will receive training in relevant tasks and be expected to attend research team meetings. SU20-9
Dr. Kshitiz
Department of Biomedical Engineering
We have established a fascinating connection between pregnancy and cancer metastasis, fundamentally changing our view of how and why cancer becomes malignant (see our paper in Nature Evolution: https://rdcu.be/bZk0D).
This discovery has opened up a new and important field to investigate cancer metastasis, how it starts, why it starts, and suggest methods to control cancer invasion. We are listing a series of very interesting projects for HRP students, and I am sure you will like at least one of them, and will get to work on a variety of techniques. These include:
1. Understanding the mechanics of how cancer invades into the surrounding tissue: involves microscopy, image analysis, traction force measurements etc.
2. Understanding the metabolism of cancer invasion: microscopy, metabolomics, lots of cool assays, bioinformatics, data analysis.
3. The evolutionary basis different levels of malignancy in mammals: dealing with farm animal tissues, histology, bioinformatics.
4. Looking at how fibrosis occurs in different tissues: nanoengineering, microscopy, image analysis, force generation analysis, and basic biochemistry.Students in our group have a high probability to be part of  publications if they contribute.
SU20-10
Dr. Liisa Kuhn 
Department of Biomedical Engineering
This project will involve using 3D scans of mastectomy patients and 3D printing to create a personalized breast prosthesis that can be worn externally to restore symmetry and aesthetics to breast cancer patients. The project requires learning how to use the scanning software skanect and the program meshmixer and solidworks or autocad and a 3D printer. The challenge will be to optimize the print parameters and design of the part to make the part print in a half a day or less while offering structural support and comfort to the patient. SU20-11
Dr. Sangamesh Kumbar

Orthopedic Surgery

The student will be involved in the design, development, and fabrication of polymeric micro-nano structures for tissue regeneration and drug delivery. These structures will be characterized for their physicochemical and biological properties using in vitro and in vivo test models. Specifically, the student will work on conducting drug release and accessing the in vitro cell response to the released drug. The student will be introduced to protocols to conduct experiments, data acquisition, analysis, oral presentations and report writing. SU20-12
Dr. Changchun Liu
Department of Biomedical Engineering
Nucleic acid-based molecular detection plays a critical role in rapid diagnostics and prompt treatment of infectious diseases. In this summer project, we will design, fabricate and test microfluidic diagnostic device and portable detection system for point of care diagnostics. The device and system will be fabricated by 3D printing technology. Please find more detail on our current research through the website: https://smds.engr.uconn.edu/. SU20-13
Dr. Leslie Loew
Berlin Center for Cell Analysis and Modeling
The lab is using computational methods to understand cell function. The project will involve learning how to use a cell modeling software tool that was developed in my lab called SpringSaLaD (https://vcell.org/ssalad). You will use it to understand the molecular and cellular principles controlling the assembly of molecular machines composed of many individual molecules containing multiple binding sites. If you are interested in computer programming, there will also be the opportunity to work on improving SpringSaLaD. SU20-14
Dr. Kazuya Machida

Department of Genetics and Genome Sciences

The goal for the summer is to develop a new single cell protein binding assay using advanced flow cytometry technologies. The student will a) construct a panel of labeled protein domain probes, b) validate the probes in biochemical and imaging analyses, c) and optimize the assay conditions using human lymphocytes. Together, these experiences enhance the student’s abilities for future careers. SU20-15
Dr. Kevin Manning
Department of Psychiatry
This is a clinical research opportunity for students interested in geriatric psychiatry or clinical neuroscience. We (a collaborative group of psychologists, psychiatrists, and neuroscientists) have an ongoing clinical trial aimed at understanding whether cognitive fitness (computerized brain games) improves both depression symptoms and cognitive functioning in a sample of older adults with treatment resistant major depression. The student will learn about the day to day operations of clinical neuroscience research by learning to administer behavioral tests and measures / entering in data to a database / and observing MRI assessments and psychiatric interviews. SU20-16
Dr. David Martinelli
Department of Neuroscience
Two different projects are underway in the lab, and the student could potentially choose either. The first regards the biochemistry of synaptic adhesion proteins, and is described well on the lab website https://health.uconn.edu/synapse/ . The second project is not described on the lab website, but involves the same set of proteins/genes, which happen to also be expressed in oligodendrocytes, the cells that make brain myelin. The project centers on understanding how myelin gets made, with the long term goal of developing a new treatment for multiple sclerosis. SU20-17
Dr. Bruce Mayer 
Department of Genetics and Genome Sciences
We have developed computational models that describe B cell receptor signaling, which is dysregulated in human leukemias such as Chronic Lymphocytic Leukemia (CLL). We have also found patterns of protein phosphorylation (which we term “SH2 profiles”) in CLL patient samples that correlate with clinical outcomes such as disease progression. The goal of the proposed project is testing and validation of the computational model. This will involve both computational work, and biochemical studies using cell lines and patient tumor samples. SU20-18
Dr. Pedro Mendes 
Center for Quantitative Medicine, Center for Cell Analysis and Modeling (Department of Cell Biology)
A critical aspect in developing computational systems biology models is to estimate values for the parameters of a model based on experimental data. Our systems biology software COPASI (http://copasi.org) is one of the leading packages for parameter estimation, which is widely used in the literature (around 100 papers per year use it). However COPASI executes parameter estimation using optimization algorithms that run in serial mode and tcan be very slow. We aim to address this problem by implementing optimization algorithms, known as “island evolutionary algorithms”, that can run in parallel making use of high-performance computing resources. This project will implement such an algorithm, to be written as a script in the R programming language and which will control COPASI through an existing API (https://github.com/jpahle/CoRC). This research project includes coding, debugging and benchmarking the algorithm using established test case problems. Finally we will apply it in an ongoing research project on genetic regulation by micro-RNAs. SU20-19
Dr. Masoud Nickaeen
Center for Cell Analysis and Modeling (Department of Cell Biology)
We will develop algorithms to numerically solve partial differential equations in domains with moving boundaries. We will implement these algorithms in computer programs and run simulations to evaluate their accuracy and validity. We will benchmark the utility of the new algorithms in the study of cellular processes that lead to or rely on the motion and deformation of the cells, their organelles or subcellular structures. SU20-20
Dr. Stefan Pinter 
Department of Genetics and Genomic Sciences
Our lab studies genetic syndromes that change the expression levels of many genes residing on a single chromosome, for example Down syndrome (DS, trisomy 21) and Turner syndrome (TS, monosomy X). We have established human stem cell (iPSC) lines of these aneuploidies, along with isogenic euploid control lines, to model cellular phenotypes associated with these conditions. To correct the dosage of genes on chromosome X or 21, we use epigenetic (XIST RNA) and RNA-targeting CRISPR tools to study their developmental impact, and map cellular phenotypes back to specific mis-expressed genes. For example, we would like to learn how trisomic genes on chromosome 21 contribute to oxidative stress in DS neurons and astrocytes, and have built a reporter iPSC line to identify which genes would have to be targeted to restore a typical redox balance SU20-21
Dr. Tannin Schmidt
Department of Biomedical Engineering
Lubricin is multi functional protein, with both lubricating and anti inflammatory properties, that is present throughout the human body. In particular, lubricin is present in synovial fluid as well as tears, and is critical for both knee joint and ocular surface health. Recombinant human lubricin has been shown to be effective in treating osteoarthritis in preclinical models, and also improving signs and symptoms of dry eye disease in humans. This project will examine the regulation of lubricin biosynthesis by various relevant cell types, as well as further explore lubricin’s recently discovered anti-inflammatory properties. SU20-22
Dr. Henry Smilowitz

Department of Cell Biology

Our laboratory in collaboration with a small biotech company, Nanoprobes, Inc. pioneered the use of heavy atom nanoparticles to enhance radiation therapy (RT) of tumors, with a focus on primary and metastatic brain tumors (Hainfeld et al., 2004). Our initial work used gold nanoparticles (Hainfeld et al. 2010, 2013). Our more recent work has been with well tolerated novel iodine nanoparticles (INPs) (Hainfeld et al., 2018, 2019). Current work in the lab is focused on 1. Improving INP-enhanced RT efficacy by tumor targeting of the INPs, 2. Studying the mechanism of INP-enhanced RT by A. Microlocalization of INPs in brain tumors, B. Quantification of double strand DNA breaks (DSBs) in tumor and non-tumor cells in the brain after RT. C. Combination of INP enhanced RT with chemotherapy, immunotherapy. Our lab also has a continuing interest in tumor dormancy and projects along those lines. For specific projects please come to talk with Dr. Smilowitz. For specific references to our published papers, please refer to our Cell Biology web site. SU20-23
Dr. Ali Tamayol

Department of Biomedical Engineering

Chronic wounds are major healthcare challenges that affect a noticeable number of people by exerting a severe financial burden and being the leading cause of limb amputation. Although challenging, healing rate can be enhanced by administration of therapies at the right time. The project in Laboratory for Innovative Microtechnologies & Biomechanics (LIMB) is focused on development of smart bandages for active monitoring of the wound environment using integrated biosensors followed by on‐demand drug delivery employing active and passive methods. The project is interdisciplinary combining biology, biomaterials, biochemistry, bioelectronics and biomechanics. SU20-24
Dr. Ephraim Trakhtenberg
Department of Neuroscience
We study how the brain develops and utilize gained knowledge to reverse-engineer regeneration of the brain tissue damaged by an injury or stroke. We employ a multidisciplinary approach spanning cutting edge genetics, epigenetics, bioinformatics, molecular biology, and gene therapy, which will provide a student with an opportunity to explore different approaches and select a project that aligns best with the individual’s career goals and interests. SU20-25
Dr. Paola Vera-licona
Center for Quantitative Medicine
The student involved in this project will apply computational systems biology and bioinformatics tools to quantitatively study Acute Myeloid Leukemia maturation state interconversion in a clinically relevant in vivo model of differentiation therapy.

Bioinformatics tools will include the use of the software package geneXplain (http://genexplain.com/) and some R packages to visualize and analyze RNA-seq data. In addition, the student will learn to use some Cytoscape apps (http://www.cytoscape.org/).

SU20-26
Dr. Yi Wu
Center for Analysis and Modeling (Department of Cell Biology)
The student has an opportunity to participating in several projects related to mechanobiology. These projects overall hinge upon a newly developed, genetically-encoded biosensor from the lab for detecting mechanical forces in living cells. The exact project for the student can focus on calibrating force sensing modules in vitro, engineering force sensors for a specific protein, or measuring forces in live cell microscopy. SU20-27
Dr. Ping Yan
Center for Cell Analysis and Modeling (Department of Cell Biology)
There is a summer research opportunity for a chemistry student to synthesize new voltage sensitive dyes (VSDs). While mainly working on organic syntheses, the student will also measure the absorption and fluorescence spectra, test the sensitivities in artificial membranes, and possibly image action potential in real cells using newly synthesized VSDs (in collaboration with Dr. Loew). SU20-28
Dr. Riqiang Yan
Department of Neuroscience
Chemokines and cytokines play a role in a variety of degenerative diseases. This project will explore the role of a particular chemokine CXCL14 on Alzheimer’s disease. Participants will be using imaging and biochemical techniques to localize and quantify CXCL14 in mouse models of Alzheimer’s disease and Alzheimer’s disease patient tissue. The effect of CXCL14 on cell migration into the brain will also be explored using culturing and live imaging techniques. SU20-29
Dr. Ji Yu
Center for Cell Analysis and Modeling (Department of Cell Biology)
Misregulation of protein phosphorylation is linked to important human diseases, particularly cancer. The goal of the project is to develop a microscopy method to analyze the phosphoproteome in a spatially resolved manner. We achieve this by combining the naturally existing phosphor-sensitive library of SH2 domains with a protease based multiplexing imaging scheme. Furthermore, the project also aims to establish and validate an imaging analysis pipeline that allows rigorous yet intuitive interpretation and visualization of the high-dimensional imaging data. SU20-30

• Student Accomplishments – December 2019

accomplishments-heading

Please join us in congratulating the UConn undergraduates named below for their significant research and creative accomplishments in summer and fall 2019. Students: if you have an accomplishment to share, please do so using this online form.


PUBLICATIONS

Pasquale Mingione V ’21 (CLAS) was a co-author on a recent publication from Dr. Geoffrey Tanner’s (Physiology and Neurobiology) lab:

Lee, D.C., Vali, K., Baldwin, S.R., Divino, J.N., Feliciano, J.L., Fequiere, J.R., Fernandez, M.A., Frageau, J.C., Longo, F.K., Madhoun, S.S., Mingione V, P., O’Toole, T.R., Ruiz, M.G., and Tanner, G.R. (2019). Dietary Supplementation With the Ketogenic Diet Metabolit Beta-Hydroxybutyrate Ameliorates Post-TBI Aggression in Young-Adult Male Drosophila. Frontiers in Neuroscience, 30 October 2019,  doi: 10.3389/fnins.2019.01140


SUMMER RESEARCH ACTIVITIES

James He ’21 (CLAS) spent part of his summer engaged in a research project at the Jackson Laboratory for Genomic Medicine in Farmington, CT. Working in the lab of Dr. Edison Liu, CEO and President of the Jackson Laboratory, James’ research investigated a specific genomic configuration in certain cancer types. He was supervised by Dr. Francesca Menghi.

Shankara Narayanan ’21 (CLAS) interned at the College of International Security Affairs at National Defense University. He researched Russian operations in Africa with Dr. Erica Marat. Shankara’s research was published by the Jamestwon Foundation, a Washington D.C. think-tank focusing on regions strategically vital to U.S. foreign policy. https://jamestown.org/the-mercenaries-behind-russian-operations-in-africa/


PRESENTATIONS

  • Saurabh Kumar '21 (CLAS)

 

2019 Evolution Conference – June 21-25, 2019 – Providence, RI

Alyssa Ferreira ’20 (CLAS) – OUR Travel Award recipient
Development of an Open-Source, Web-Based Database Model for the Tripal Framework to Improve the Quality of Non-Model Eukaryotic Genome Annotation

2019 IEEE MIT Undergraduate Research Technology Conference – October 11-13, 2019 – Cambridge, MA

Camden Craigie ’20 (ENG), Samuel Pevsner ’20 (ENG), Brittany Smith ’20 (ENG) – OUR Travel Award recipients
Whopper Popper

American Physical Society, Division of Nuclear Physics 2019 Fall Meeting – October 14-17, 2019 – Crystal City, Virginia

Donovan Davino, Aug ’20 (CLAS) – OUR Travel Award recipient
Exploring Thermal Conductivity of Heat Treated Niobium at Cryogenic Temperatures to Produce More Efficient SRF Cavities

Sean Oh ’20 (CLAS) – OUR Travel Award recipient
Radiation Damage Recovery of PbWO4 Crystals with Optical Bleaching

Megan Sturm ’21 (CLAS) – OUR Travel Award recipient
Efficiency Measurements for HPGe Detectors

Biomedical Engineering Society (BMES) Annual Meeting – October 16-19, 2019 – Philadelphia, PA

Ariane Garrett ’20 (ENG) – OUR Travel Award recipient
A Novel Cerebral Spinal Fluid Flow Sensor

Rohit Makol ’20 (ENG) – OUR Travel Award recipient
Optimization of Immunohistochemical Staining Methods in Rat Spinal Cord Tissue

Morgan McNamara ’20 (ENG) – OUR Travel Award recipient
Crosstalk Detection Circuit for Microelectrode Arrays

Helen Phu, Dec ’20 (ENG) – OUR Travel Award recipient
A User-Friendly Interface to Wirelessly Control Neuroprostheses

Caroline Thompson ’20 (ENG) – OUR Travel Award recipient
Bioresorbable Bone Fixation Devices for Load Bearing Fractures Utilizing Silk and Hydroxyapatite

Society for Neuroscience (SFN) Annual Meeting – October 19-23, 2019 – Chicago, IL 

Aditi Anam ’20 (CLAS) – OUR Travel Award recipient
Persistence of Dorsal and Ventral Hippocampal Remapping after Exploring a Novel Environment

Saurabh Kumar ’20 (CLAS) – OUR Travel Award recipient
Developmental Changes to the Neural Stem Cell Niche in Fetal-Onset Hydrocephalus

Judie Wang ’20 (CLAS) – OUR Travel Award recipient
Observational Learning in a Working Memory, Food-Reward Task in Rats

Institute of Chemical Engineers (AIChE) Annual Meeting – November 10-15, 2019 – Orlando, FL

Nicole Khusid ’22 (ENG, CLAS) – OUR Travel Award recipient
Characterization of Rn-220 as a Calibration Source in EXO-200

Brianna Markunas ’20 (ENG) – OUR Travel Award recipient
Hydrodeoxygenation of Guaiacol with Ru Catalysts on Various Activated Carbon Supports

Association for Behavioral and Cognitive Therapies Annual Convention – November 21-24, 2019 – Atlanta, GA 

Adrienne Nguyen ’20 (CLAS) – OUR Travel Award recipient
Relationship between Internalizing Problems and Internet Gaming Disorder Symptoms among Treatment-Seeking Youth

Gabrielle Sharbin ’20 (CAHNR) – OUR Travel Award recipient
Evaluating Addictive Behaviors in HIV/Substance Abuse Populations

• SURF 2020 – Program Reminders

With the SURF 2020 application cycle underway, we would like to take the opportunity to emphasize some key reminders regarding the SURF program. SURF continues to offer students from across the academic disciplines the opportunity to focus full-time on a research or creative project for 9-10 weeks over the summer. Shorter-term projects may also be proposed for funding through this program, with the requested award amount scaled down accordingly.

Application Management System

We will continue our use of the UConn Quest Portal, an application management system new last year and powered by SurveyMonkey Apply, to collect, process, and review SURF applications for summer 2020. This system allows students to complete the various components of the SURF application in the most appropriate order for them and to make edits as needed prior to submission of their application.

  • Letters of Recommendation. Two letters of recommendation are required for the SURF application.
    • Student applicants must request recommendation letters through the application system by entering the name and UConn email address of the faculty members who have agreed to write letters on their behalf. The system will send the recommenders an individual link for recommendation submission.
    • Faculty recommenders will receive an email from the Quest Portal on behalf of the student who is requesting a letter of recommendation. Both first and second recommenders will submit their letters through the portal by uploading a PDF file. Faculty who are serving as the project supervisor (1st recommender) will also be asked to answer a series of research compliance questions.

Application Reminders (See the full application outline here)

  • Budget reminders. Students should visit the Budget Policies and Samples page for detailed guidance about allowable expenses (now including maximum dollar amounts for expenses like poster printing) and examples of budgets that show the appropriate level of detail.
    • Student requesting stipend as part of a Plan A or Plan C budget should be careful to use accurate stipend language as noted on the Budget Policies page.
    • Faculty advisors of students conducting laboratory research: Please work with your advisee to ensure s/he has accurate information about the costs of lab supplies that can be procured through university purchasing channels and contracts.
  • Timeline reminders. Student should visit the Sample Timeline page for guidance on developing a detailed timeline. The SURF proposal timeline should clearly indicate start and end dates, the anticipated number of project work hours each week, and a week-by-week listing of planned project milestones.
  • Research Compliance reminders. Students and faculty should note that research compliance approvals are complex and take significant time. Please plan accordingly. While the necessary approvals are not required at the application stage, students should be aware that SURF funding will not be disbursed until all necessary compliance documents have been submitted to OUR, and that SURF awards will be rescinded if documentation is not received by the stated deadline. Both faculty and students are reminded to take care in reading the series of questions concerning biological materials as this category encompasses a wide range of items.

ESTA Requirement/Documentation of Safety Training

Students proposing SURF project work that will take place in a setting with hazards such as a lab, theater, or studio will be required to complete the Employee Safety Training Assessment (ESTA) with their faculty mentor to determine which safety training courses are required in order to work where hazards are present.

  • Student applicants will be asked about completion of the ESTA in the Research Compliance section of the application. We encourage students to complete the ESTA with their faculty supervisor prior to submitting their application.
  • Information on how to document completion of the ESTA and completion of the indicated training/registration for upcoming training is available on OUR’s Safety Training page.

We look forward to another excellent set of SURF applications this year! The application deadline is 11:59pm on Monday, February 3, 2020. Letters of recommendation are due by this date as well. We encourage all students to make use of SURF Office Hours to seek feedback on their draft materials and to ask any questions they might have about the program or the application. SURF Office Hours are scheduled for 1/21, 1/24, and 1/27. Full detail about times and location can be found in the sidebar on the main SURF webpage.

• Deadlines Approaching for Summer 2020 Research Opportunities

Don’t miss out on the opportunity to get valuable research experience this summer. Undergraduate students who are interested in participating in a summer research program should be preparing applications and requesting letters of recommendation now! Check out the following summer research programs with January and early February deadlines.

University of Buffalo, School of Medicine and Biomedical Sciences – Summer Undergraduate Research Experience
Deadline: January 15, 2020
http://medicine.buffalo.edu/education/undergraduate/sure.html
The School of Medicine and Biomedical Sciences offers a summer undergraduate research program for students in their sophomore year or later at the time of application. Some level of previous research experience is recommended. Offers extended to only 6-8 students; $3,500 stipend and housing provided.

NORC Summer Intern Program – University of Chicago
Deadline: January 24, 2020
http://www.norc.org/WorkingAtNORC/Pages/internship-programs.aspx
This 9-week paid summer internship is designed for upper level undergraduate students with an interest in social science research. The program introduces interns to the design, implementation and analysis of large surveys. Students will have the opportunity to learn the principles of survey research from leading practitioners while exploring recent innovations in data collection techniques and the integration of survey data with other types of data.

Cary Institute of Ecosystem Studies – Summer REU Program in Translational Ecology
Deadline: January 24, 2020
http://www.caryinstitute.org/students/reu-program
Cary Institute’s Research Experiences for Undergraduates (REU) program provides the opportunity for 8-12 students each summer to conduct ecology research at a world-class institute. Students selected for this 12-week program receive a $6,600 stipend, a $900 food allowance and housing in an Institute dormitory.

NASA Student Airborne Research Program (SARP) – Bay Area Environmental Research Institute
Deadline: January 29, 2020
https://baeri.org/sarp/2020/
This 8-week summer internship program is targeted at rising seniors with a strong background in any of the physical, chemical, or biological sciences, mathematics or engineering and an interest in applying their background to the study of the Earth system. Research areas include atmospheric chemistry, air quality, forest ecology, and ocean biology. SARP participants will acquire hands-on research experience using one or more NASA Airborne Science Program flying science laboratories.

The Children’s Hospital of Philadelphia Research Institute Summer Scholars Program (CRISSP)
Deadline: January 31, 2020
https://crissp.research.chop.edu/
The CHOP Research Institute Summer Scholars Program (CRISSP) is committed to educating and training future leaders in the biomedical sciences, with a special emphasis on advancing laboratory, clinical, behavioral and translational pediatric research. Summer stipend of $5,000 and housing provided.

NSF-REU Internships in Astronomy – Maria Mitchell Observatory
Deadline: February 1, 2020
http://www.mmo.org/get-involved/internships/reu
Six REU internship positions are available for qualified undergraduate astronomy and physics students. These positions provide students the opportunity to conduct independent research supervised by a senior staff member of MMO. $2,000 per month stipend and housing provided.

Pediatric Oncology Education (POE) Program – St. Jude Children’s Research Hospital
Deadline: February 1, 2020
http://www.stjude.org/poe
This program provides a short-term training experience in either laboratory research or clinical research. Students will be matched with a faculty mentor and will participate in the mentor’s ongoing research projects. Qualified students with an interest in cancer research are encouraged to apply. $400/week stipend provided to selected students.

SAO REU Summer Intern Program
Deadline: February 1, 2020

https://www.cfa.harvard.edu/opportunities/reu//overview.html
The SAO Summer intern program is a research experience for undergraduates where students work on an astrophysics research project under the supervision of an SAO or Harvard scientist. Undergraduates interested in astronomy, astrophysics, physics, or related physical sciences are encouraged to apply. The 10-week program takes place at the Harvard-Smithsonian Center for Astrophysics. Stipend of $500/week.

Arecibo Observatory REU Summer Program
Deadline: February 3, 2020 (online application); February 10, 2020 (supporting documents); http://outreach.naic.edu/ao/reut
Students selected for this 10-week summer research opportunity will work with staff scientists at the Arecibo Observatory in Puerto Rico on projects related to ongoing research or instrumentation development. Applicants must be a US citizen or permanent resident and must be enrolled in a bachelor’s degree program during Fall 2020. Strong candidates will be students majoring in astronomy, physics, computer science, and electrical engineering. Stipend of $450 per week.

Summer Internships in Science and Technology (SIST) – Fermi National Accelerator Laboratory (Fermilab)
Deadline: February 3, 2020
http://diversity.fnal.gov/sist/
Fermilab’s SIST program offers 12-week summer internships in science and technology. Internships available in physics, engineering (mechanical, electrical and computer), materials science, mathematics and computer science offer a chance for students to conduct research with Fermilab scientists and engineers. Hourly pay ranges from $15.83/hr-$20.56/hr depending on your year in school.

Summer Undergraduate Research Program – Gerstner Sloan Kettering
Deadline: February 3, 2020
http://www.sloankettering.edu/summer-undergraduate-research-program
The Graduate School of Biomedical Sciences at Memorial Sloan Kettering sponsors a 10-week summer research program for undergraduate students who are interested in the biomedical sciences. This is a competitive program that accepts 20 students. Applicants must have research experience. $6,000 stipend and housing provided.

REU Program in Solar and Space Physics – University of Colorado Boulder
Deadline: February 3, 2020
http://lasp.colorado.edu/home/education/reu/
This 10-week summer REU program targets students with an interest in solar and space physics. Students work under the direction of scientists from one of a number of participating institutions, including Colorado’s Laboratory of Atmospheric and Space Physics and the High Altitude Observatory. $500/week stipend and housing provided.

Summer Fellowship Program in Vision Science, Center for Visual Science, University of Rochester
Deadline: February 3, 2020
http://www.cvs.rochester.edu/training/fellowships/index.html
Rising juniors and seniors with an interest in neuroscience, cognitive science and biomedical science are encouraged to apply for this summer of supervised laboratory training. $4,136 stipend and on-campus housing provided.

State University of New York Upstate Medical University – Summer Undergraduate Research Fellowship (SURF) Program
Deadline: February 3, 2020
http://www.upstate.edu/grad/programs/summer.php<
Applicants to this 10-week program should be undergraduate students in good academic standing, who will be between their junior and senior years during the summer of 2020, and are majors in chemistry, biology, or a related field. Applicants should have a strong interest in pursuing a Ph.D. degree in biomedical research. $3,500 stipend and housing provided.

Hartford Hospital Summer Student Pre-Med & Research Program
Deadline: February 7, 2020
https://hartfordhospital.org/health-professionals/education/residencies-fellowships/summer-student-pre-med-research-program
This 10-week program offers pre-med students an introduction to research methodology, patient treatment, and ethical issues in medicine. Applicants must be pre-med students completing their junior year by May 2020. Minimum of $3,400 award for selected students.

• Plan Now for Summer 2020 Research Opportunities

Undergraduate students who are interested in participating in a summer research or internship program need to plan ahead. December is the time to gather together all the required elements of the applications, including faculty letters of recommendation. All of the exciting summer opportunities listed below have application deadlines in December or January! Check out the programs below and consider if any would fit with your research goals and interests.

DAAD RISE – Research Internships in Science and Engineering in Germany
Deadline: Applications are due by December 15, 2019; Letters of Reference are due by December 22,
2019; https://www.daad.de/rise/en/
DAAD RISE gives students in the fields of biology, chemistry, earth sciences, engineering, and physics the chance to spend a summer working on research projects with doctoral students at German universities and research institutions. Interested students must first register online between November 1, 2019 and December 15, 2019. Student application materials must be submitted by December 15, 2019, with letters of reference due December 22, 2019.

Science Undergraduate Laboratory Internships (SULI)
Deadline: January 9, 2020 at 5:00 PM ET
https://science.osti.gov/wdts/suli
The Science Undergraduate Laboratory Internship (SULI) program encourages undergraduate students to pursue science, technology, engineering, and mathematics (STEM) careers by providing research experiences at the Department of Energy (DOE) laboratories. Selected students participate as interns appointed at one of 17 participating DOE laboratories.

Summer ORISE Fellowship Opportunities at the CDC
Deadline: January 10, 2020; http://www.cdc.gov/nceh/dls/orise.html
Appointments through the Oak Ridge Institute for Science and Education (ORISE) Fellowship Program. Undergraduate students majoring in the applied sciences may apply. Biology and chemistry majors are preferred. Stipend of approximately $2,900 per month for undergraduate students.

Mickey Leland Energy Fellowship Program (MLEF)
Deadline: January 12, 2020; http://orise.orau.gov/mlef/
The Mickey Leland Energy Fellowship (MLEF) is sponsored by the U.S. Department of Energy’s Office of Fossil Energy. It is a 10-week summer internship program that provides opportunities to students who are pursuing degrees in STEM fields. The goal of the program is to improve opportunities for minority and female students in these fields, but all eligible candidates are encouraged to apply.

SENS Research Foundation (SRF) Summer Scholars Program
Deadline: January 15, 2020 at 12:00pm PST

http://www.sens.org/education/research-opportunities/srf-summer-scholars-program
This program offers undergraduate students the opportunity to conduct biomedical research under the guidance of a scientific mentor. Paid positions are available at a number of research institutions including Buck Institute for Research on Aging, Harvard Medical School, Sanford Consortium for Regenerative Medicine, and SRF Research Center. Full descriptions of each research project can be found at the website link above.

Cold Spring Harbor Laboratory – Undergraduate Research Program 2020
Deadline: January 15, 2020; https://www.cshl.edu/education/undergraduate-research-program
The URP program is designed to give students an opportunity to conduct first-rate research under the supervision of senior laboratory staff in the areas of cancer biology, neuroscience, plant biology, cellular and molecular biology, genetics and bioinformatics, and genomics. Selected students receive room and board in addition to a $5,500 stipend.

ThinkSwiss Research Scholarships
Deadline: January 15, 2020; http://thinkswiss.tumblr.com/About
ThinkSwiss scholarships support highly motivated undergraduates who are interested in doing research at a public Swiss university or research institute. The scholarship is open to students in all fields. A monthly stipend of approximately $1,650 is provided for a period of 2-3 months.

Summer Research Experience Program in Cancer Science – Roswell Park Cancer Institute
Deadline: January 17, 2020;
https://www.roswellpark.org/education/summer-programs/college-students
This 10-week summer research program is open to students who are college juniors or junior-equivalents (credit-wise) at the time of application and who are interested in pursuing an advanced degree towards a biomedical research career. Areas of research include, but are not limited to: cancer biophysics, tumor immunology, cancer genetics, molecular pharmacology. Selected students will be working in a Roswell Park department alongside professional researchers and graduate students.

Summer Public Health Scholars Program (SPHSP) – Columbia University
Deadline: January 31, 2020; http://ps.columbia.edu/education/student-life/office-diversity/programs/college-and-post-baccalaureate-students/summer-publ
The Summer Public Health Scholars Program (SPHSP) is designed for undergraduate students who are interested in public health and biomedical science careers. Applicants must have completed at least two years of college. Students from underrepresented groups are encouraged to apply, and 42 students will be selected to participate. Students will receive a stipend, housing, and round trip travel.

Summer Undergraduate Program in Engineering Research at Berkeley (SUPERB)
Deadline: January 31, 2020;
https://eecs.berkeley.edu/resources/undergrads/research/superb
The SUPERB Computer and Information Science and Engineering program provides undergraduates with the opportunity to work on research projects focused on using Big Data. This 9-week program is open to rising juniors or seniors who have completed some upper division course work in Electrical Engineering and Computer Sciences. Stipend of $4,500, housing, meals, and $600 travel allowance provided.

Maternal Child Health Careers/Research Initiatives for Student Enhancement – Undergraduate Program (MCHC/RISE-UP)
Deadline: January 31, 2020;
https://www.kennedykrieger.org/training/programs/center-for-diversity-in-public-health-leadership-training/mchc-rise-up
MCHC/RISE-UP provides opportunities for enhanced public leadership in the area of maternal and child health. Three tracks are offered: clinical, research, and community engagement and advocacy. This program is open to juniors, seniors, and recent baccalaureate degree scholars interested in learning more about public health. A stipend ($3,000-$3,500) and housing are provided.

• Congratulations, 2020 SHARE Award Recipients!

Congratulations to the 14 student-faculty pairs selected to receive SHARE Awards to support their work on projects of mutual interest during the Spring 2020 semester!

Click here to view the full list of Spring 2020 SHARE Recipients.

The SHARE Award program supports undergraduate research projects in the social sciences, humanities, and arts. Designed especially for students in the earlier stages of their college careers, SHARE apprenticeship experiences offer students an introduction to research and help them develop the skills they will need for future research projects.

Click here for more information on the SHARE Award program.

Setbacks in Your Project? We’ve All Been There

Setbacks in Your Project? We've All Been There. By PRA Maria.By Maria Latta, OUR Peer Research Ambassador

Whether you are working on lab work, human subjects research, an outreach project, or a creative endeavor, you have probably faced at least one setback along the way. I certainly have. Some of the challenges I have faced are: my experiments produced results that didn’t support my hypothesis, my IRB approval was delayed and required revisions, the organizations I partnered with underwent changes that impacted the timeline of my project, and I have just had mental blocks on how to move forward. Continue reading

Meet the PRAs: Grace Nichols

Meet Grace Nichols ’20, an OUR Peer Research Ambassador (PRA) majoring in Molecular & Cell Biology and minoring in Mathematics.

Meet the PRAs: Grace.What is the focus of your research?

I currently work in a neuroscience laboratory at UConn Health where we are studying the auditory system and occurrence of tinnitus in mice. I also assist with clinical research at Connecticut Children’s Medical Center. Prior to these experiences, I worked in a computational biology lab and helped in producing mathematical models of the genes promoting chemotherapy resistance in Triple Negative Breast Cancer tumors.

Why did you get involved in research?

When I first came to UConn, I was pursuing a major in Mathematics/Actuarial Science and was planning to become an actuary. After taking a few science courses and shadowing healthcare providers, I ended up changing my career track and switching my major to Molecular and Cell Biology. I initially got involved in research because I wanted to gain more exposure to how scientific investigation connects back to patient and community health. Participating in computational biology research provided a unique and valuable bridge between my background in mathematics and my new interest of cell biology.

What advice would you give to incoming freshmen?

Get involved in as many different activities as possible, attend different lectures and workshops offered on campus, and take a wide breadth of classes. You never know who you may meet and connect with, or what new topics will pique your interest. College is one of the few times you will get to freely explore in this way, so take advantage of it!

What do you enjoy the most about participating in research activity?

What I enjoy most about my research activity is how no two days are the same in the laboratory – there are always new problems to solve and every day is a new learning experience. Being in such a dynamic work environment has helped me to develop my personal and professional skills. Under the guidance of my mentors, I have gained experience in planning and troubleshooting experiments, learned how to communicate the goals and results of a project with my peers, and gained confidence in myself as an investigator. This enriching experience reaffirmed my interest in the healthcare field, and inspired me to pursue scientific research beyond my undergraduate education.

What are your plans after graduation? How has involvement in research influenced your plans and prepared you for the future?

After graduation I plan to apply to medical school. My involvement in undergraduate research has truly been a positive experience, and has encouraged me to incorporate scientific investigation into my higher education and career goals. It is because of my time spent in research that I plan to apply to MD/PhD programs.